| alleleCounts |
Estimating population allele counts |
| alleleFreq |
Estimating population allele frequencies |
| ancestralAlleles |
Writing FASTA-file with ancestral alleles |
| calculateF2 |
Calculate F2 between samples, and within/between populations |
| geneticDist |
Estimating the genetic distance between individuals |
| inbreeding |
Estimating the inbreeding coefficient |
| majorMinor |
Estimating major and minor alles |
| polymorphicWindows |
Identifying windows for which samples are polymorphic |
| printGLF |
Printing a GLF file to screen |
| saf |
Estimating Site Allele Frequencies |